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Petroleum Microbiology and Bioremediation

BIOM4428
3 hours English

Petroleum Microbiology and Bioremediation

Petroleum Microbiology
1 General Introduction: / - General introduction bout petroleum Microbiology / -An overview about composition and nature of crude oil around the world. / - Origins and distribution of petroleum
2 Biological origin and accumulation of petroleum from microfossils and sedimentary basis. / - Microbial aspects of oil prospecting
3 Microbial metabolism of aliphatic hydrocarbons (straight and branched chains and cyclic compinds) under aerobic and anaerobic conditions
4 Microbial metabolism of cyclic aromatic hydrocarbons under anaerobic and aerobic conditions
5 Methane-utilizing bacteria (methanotrophs) microbial metabolism of methane
6 Taxonomy of methane producing bacteria Identification, Nomenclature, classification of methane producing bacteria, methanogensis
7 Bioremediation of crude oil pollution and environmental clean up / -what is bioremediation / -advantages of bioremediation / -comparison between bioremediation and other methods of removal of crude oil pollution / -types of bioremediation (biostimulation and bioaugmentation) / -differences between biostimulation and bioaugmentation / -environmental factors affecting the speed and capacity of bioremediation (temperature, oxygen levels, nutrients availability)
1.1 Mapped to: K2, K3

describe microbial degradation of crude oil under aerobic and anaerobic conditions

Teaching Strategy 1.In-class lecturing where the previous knowledge is linked to the current and future topics. 2.Homework assignments. 3.Discussions (connecting what they learn in the class and applying this information in laboratory). 4. Handout of lecture notes for each topic
Assessment Methods Exams, Assignments, Course activities and Written analyses
1.2 Mapped to: K2, K3

Describe microbial methane utilizing pathways

Teaching Strategy 1.In-class lecturing where the previous knowledge is linked to the current and future topics. 2.Homework assignments. 3.Discussions (connecting what they learn in the class and applying this information in laboratory). 4. Handout of lecture notes for each topic
Assessment Methods Exams, Assignments, Course activities and Written analyses
1.3 Mapped to: K2, K3

Explain microbial methane producing pathways

Teaching Strategy 1.In-class lecturing where the previous knowledge is linked to the current and future topics. 2.Homework assignments. 3.Discussions (connecting what they learn in the class and applying this information in laboratory). 4. Handout of lecture notes for each topic
Assessment Methods Exams, Assignments, Course activities and Written analyses
1.4 Mapped to: K1, K2, K3

Explain the roles of microorganisms in bioremediation and environmental clean-up

Teaching Strategy 1.In-class lecturing where the previous knowledge is linked to the current and future topics. 2.Homework assignments. 3.Discussions (connecting what they learn in the class and applying this information in laboratory). 4. Handout of lecture notes for each topic
Assessment Methods Exams, Assignments, Course activities and Written analyses
2.1 Mapped to: S1, S2, S3

Predict the products of microbial degradation of crude oil

Teaching Strategy Students will receive credit for these activities based on their responses to the particular questions and assignments. These will include reading summaries, reflective questions, quizzes
Assessment Methods Evaluation of the topics prepared by students according to the content, arrangement, and covering of the topic. Midterm and final exams. Checking the homework assignments. Course work reports
2.2 Mapped to: S1, S2, S3

Evaluate methods for isolation and identification of hydrocarbons degrading bacteria

Teaching Strategy Students will receive credit for these activities based on their responses to the particular questions and assignments. These will include reading summaries, reflective questions, quizzes
Assessment Methods Evaluation of the topics prepared by students according to the content, arrangement, and covering of the topic. Midterm and final exams. Checking the homework assignments. Course work reports
2.3 Mapped to: S1, S2, S3

Link between microbial degradation of crude oil and microbial degradation of crude oil derivatives (plastics, pesticides, paints)

Teaching Strategy Students will receive credit for these activities based on their responses to the particular questions and assignments. These will include reading summaries, reflective questions, quizzes
Assessment Methods Evaluation of the topics prepared by students according to the content, arrangement, and covering of the topic. Midterm and final exams. Checking the homework assignments. Course work reports
3.1 Mapped to: V1, V2

To demonstrate independently and with multi-disciplinary teams.

Teaching Strategy Engage student in carrying out internet search. The ability to debate the scientific basis of topics related to safety and occupational health in laboratories. Writing group reports. Solving problems in team. Cooperative learning and application of scientific method in thinking the scientific problem solving. Work as part of a team. Conducting group experiments and writing group reports.
Assessment Methods 1-Oral exams. 2-Evaluation of student essays assignments and search work. 3-Observation of student ethical and moral behavior. 4-Students’ attendance is recorded during lectures. 5-Assessment of the student reports. 6-Grading homework assignments
3.2 Mapped to: V1, V2

To cooperate in providing scientific and technical services in microbiology

Teaching Strategy Engage student in carrying out internet search. The ability to debate the scientific basis of topics related to safety and occupational health in laboratories. Writing group reports. Solving problems in team. Cooperative learning and application of scientific method in thinking the scientific problem solving. Work as part of a team. Conducting group experiments and writing group reports.
Assessment Methods 1-Oral exams. 2-Evaluation of student essays assignments and search work. 3-Observation of student ethical and moral behavior. 4-Students’ attendance is recorded during lectures. 5-Assessment of the student reports. 6-Grading homework assignments
3.3 Mapped to: V3

To demonstrate responsibility and accountability

Teaching Strategy Engage student in carrying out internet search. The ability to debate the scientific basis of topics related to safety and occupational health in laboratories. Writing group reports. Solving problems in team. Cooperative learning and application of scientific method in thinking the scientific problem solving. Work as part of a team. Conducting group experiments and writing group reports.
Assessment Methods 1-Oral exams. 2-Evaluation of student essays assignments and search work. 3-Observation of student ethical and moral behavior. 4-Students’ attendance is recorded during lectures. 5-Assessment of the student reports. 6-Grading homework assignments